uboot: (firmwareOdroidC2/C4) don't invoke patch tool, use patches = [] instead

https://github.com/NixOS/nixpkgs/blob/master/pkgs/stdenv/generic/setup.sh#L948
this can do it nicely.

Signed-off-by: Anton Arapov <anton@deadbeef.mx>
This commit is contained in:
Anton Arapov 2021-04-03 12:58:10 +02:00 committed by Alan Daniels
commit 56de2bcd43
30691 changed files with 3076956 additions and 0 deletions

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@ -0,0 +1,29 @@
{lib, stdenv, fetchFromGitHub, cmake, zlib, ncurses}:
stdenv.mkDerivation rec {
pname = "somatic-sniper";
version = "1.0.5.0";
src = fetchFromGitHub {
owner = "genome";
repo = "somatic-sniper";
rev = "v${version}";
sha256 = "0lk7p9sp6mp50f6w1nppqhr40fcwy1asw06ivw8w8jvvnwaqf987";
};
patches = [ ./somatic-sniper.patch ];
nativeBuildInputs = [ cmake ];
buildInputs = [ zlib ncurses ];
enableParallelBuilding = false;
meta = with lib; {
description = "Identify single nucleotide positions that are different between tumor and normal";
license = licenses.mit;
homepage = "https://github.com/genome/somatic-sniper";
maintainers = with maintainers; [ jbedo ];
platforms = platforms.linux;
};
}

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@ -0,0 +1,26 @@
diff --git a/CMakeLists.txt b/CMakeLists.txt
index 6d5a180..7254292 100644
--- a/CMakeLists.txt
+++ b/CMakeLists.txt
@@ -11,7 +11,7 @@ set(CMAKE_MODULE_PATH
)
include(TestHelper)
-include(VersionHelper)
+#include(VersionHelper)
include(ProjectHelper)
# NOTE: for sniper we want the exe suffix to be like 0.7.4, not just 0.7
diff --git a/vendor/samtools.patch b/vendor/samtools.patch
index f173017..654f878 100644
--- a/vendor/samtools.patch
+++ b/vendor/samtools.patch
@@ -6,7 +6,7 @@ diff -Nuar a/Makefile b/Makefile
samtools:lib $(AOBJS)
- $(CC) $(CFLAGS) -o $@ $(AOBJS) -lm $(LIBPATH) $(LIBCURSES) -lz -L. -lbam
-+ $(CC) $(CFLAGS) -o $@ $(AOBJS) -lm $(LIBPATH) $(LIBCURSES) -L. -lbam -lz
++ $(CC) $(CFLAGS) -o $@ $(AOBJS) -lm $(LIBPATH) -lncurses -L. -lbam -lz
razip:razip.o razf.o
$(CC) $(CFLAGS) -o $@ razf.o razip.o -lz