uboot: (firmwareOdroidC2/C4) don't invoke patch tool, use patches = [] instead

https://github.com/NixOS/nixpkgs/blob/master/pkgs/stdenv/generic/setup.sh#L948
this can do it nicely.

Signed-off-by: Anton Arapov <anton@deadbeef.mx>

pkgs/applications/science/chemistry/pymol/default.nix

@@ -0,0 +1,77 @@
+{ stdenv
+, lib
+, fetchFromGitHub
+, makeDesktopItem
+, python3
+, python3Packages
+, netcdf
+, glew
+, glm
+, freeglut
+, libpng
+, libxml2
+, tk
+, freetype
+, msgpack
+}:
+let
+  pname = "pymol";
+  description = "A Python-enhanced molecular graphics tool";
+
+  desktopItem = makeDesktopItem {
+    name = pname;
+    exec = pname;
+    desktopName = "PyMol Molecular Graphics System";
+    genericName = "Molecular Modeler";
+    comment = description;
+    icon = pname;
+    mimeTypes = [
+      "chemical/x-pdb"
+      "chemical/x-mdl-molfile"
+      "chemical/x-mol2"
+      "chemical/seq-aa-fasta"
+      "chemical/seq-na-fasta"
+      "chemical/x-xyz"
+      "chemical/x-mdl-sdf"
+    ];
+    categories = [ "Graphics" "Education" "Science" "Chemistry" ];
+  };
+in
+python3Packages.buildPythonApplication rec {
+  inherit pname;
+  version = "2.5.0";
+  src = fetchFromGitHub {
+    owner = "schrodinger";
+    repo = "pymol-open-source";
+    rev = "v${version}";
+    sha256 = "sha256-JdsgcVF1w1xFPZxVcyS+GcWg4a1Bd4SvxFOuSdlz9SM=";
+  };
+
+  buildInputs = [ python3Packages.numpy glew glm freeglut libpng libxml2 tk freetype msgpack netcdf ];
+  NIX_CFLAGS_COMPILE = "-I ${libxml2.dev}/include/libxml2";
+  hardeningDisable = [ "format" ];
+
+  setupPyBuildFlags = [ "--glut" ];
+
+  installPhase = ''
+    python setup.py install --home="$out"
+    runHook postInstall
+  '';
+
+  postInstall = with python3Packages; ''
+    wrapProgram $out/bin/pymol \
+      --prefix PYTHONPATH : ${lib.makeSearchPathOutput "lib" python3.sitePackages [ Pmw tkinter ]}
+
+    mkdir -p "$out/share/icons/"
+    ln -s ../../lib/python/pymol/pymol_path/data/pymol/icons/icon2.svg "$out/share/icons/pymol.svg"
+    cp -r "${desktopItem}/share/applications/" "$out/share/"
+  '';
+
+  meta = with lib; {
+    broken = stdenv.isDarwin;
+    inherit description;
+    homepage = "https://www.pymol.org/";
+    license = licenses.mit;
+    maintainers = with maintainers; [ samlich ];
+  };
+}