uboot: (firmwareOdroidC2/C4) don't invoke patch tool, use patches = [] instead

https://github.com/NixOS/nixpkgs/blob/master/pkgs/stdenv/generic/setup.sh#L948
this can do it nicely.

Signed-off-by: Anton Arapov <anton@deadbeef.mx>

pkgs/applications/science/misc/cytoscape/default.nix

@@ -0,0 +1,44 @@
+{ lib, stdenv, fetchurl, jre, makeWrapper, substituteAll, coreutils }:
+
+stdenv.mkDerivation rec {
+  pname = "cytoscape";
+  version = "3.9.1";
+
+  src = fetchurl {
+    url = "https://github.com/cytoscape/cytoscape/releases/download/${version}/${pname}-unix-${version}.tar.gz";
+    sha256 = "sha256-I4C2yGiIygnFUkRBC4LBSQFgjZlVKCoQGRphynVpscw=";
+  };
+
+  patches = [
+    # By default, gen_vmoptions.sh tries to store custom options in $out/share
+    # at run time. This patch makes sure $HOME is used instead.
+    (substituteAll {
+      src = ./gen_vmoptions_to_homedir.patch;
+      inherit coreutils;
+    })
+  ];
+
+  nativeBuildInputs = [ makeWrapper ];
+  buildInputs = [ jre ];
+
+  installPhase = ''
+    mkdir -pv $out/{share,bin}
+    cp -Rv * $out/share/
+
+    ln -s $out/share/cytoscape.sh $out/bin/cytoscape
+
+    wrapProgram $out/share/cytoscape.sh \
+      --set JAVA_HOME "${jre}" \
+      --set JAVA  "${jre}/bin/java"
+
+    chmod +x $out/bin/cytoscape
+  '';
+
+  meta = {
+    homepage = "http://www.cytoscape.org";
+    description = "A general platform for complex network analysis and visualization";
+    license = lib.licenses.lgpl21;
+    maintainers = [lib.maintainers.mimame];
+    platforms = lib.platforms.unix;
+  };
+}

pkgs/applications/science/misc/cytoscape/gen_vmoptions_to_homedir.patch

@@ -0,0 +1,19 @@
+diff -Nur a/gen_vmoptions.sh b/gen_vmoptions.sh
+--- a/gen_vmoptions.sh	2020-03-30 21:57:47.000000000 +0100
++++ b/gen_vmoptions.sh	2020-05-05 09:49:57.974989824 +0100
+@@ -1,13 +1,10 @@
+ #!/bin/sh
+ # Generates the Cytoscape.vmoptions file
+ 
+-script_path="$(dirname -- $0)"
+-
+-#vm_options_path="$HOME/.cytoscape"
+-vm_options_path=$script_path
++vm_options_path="$HOME/.cytoscape"
+ 
+ if [ ! -e $vm_options_path ]; then
+-    /bin/mkdir $vm_options_path
++    @coreutils@/bin/mkdir $vm_options_path
+ fi
+ 
+ # Determine amount of physical memory present: