56de2bcd43
https://github.com/NixOS/nixpkgs/blob/master/pkgs/stdenv/generic/setup.sh#L948 this can do it nicely. Signed-off-by: Anton Arapov <anton@deadbeef.mx>
45 lines
1.5 KiB
Nix
45 lines
1.5 KiB
Nix
{ lib, stdenv, fetchFromGitHub, fetchpatch, cmake, makeWrapper, perlPackages, libminc }:
|
|
|
|
stdenv.mkDerivation rec {
|
|
pname = "mni_autoreg";
|
|
version = "unstable-2017-09-22";
|
|
|
|
src = fetchFromGitHub {
|
|
owner = "BIC-MNI";
|
|
repo = pname;
|
|
rev = "ab99e29987dc029737785baebf24896ec37a2d76";
|
|
sha256 = "0axl069nv57vmb2wvqq7s9v3bfxwspzmk37bxm4973ai1irgppjq";
|
|
};
|
|
|
|
patches = [
|
|
# Pull upstream workaround for -fno-common toolchains:
|
|
# https://github.com/BIC-MNI/mni_autoreg/pull/28
|
|
(fetchpatch {
|
|
name = "fno-common.patch";
|
|
url = "https://github.com/BIC-MNI/mni_autoreg/commit/06adfacbd84369ea3bcc4376596ac1c0f2e49af9.patch";
|
|
sha256 = "004sdrbx9kcj1qqwjly6p03svakl0x2sbv83salyg63fv67jynx8";
|
|
})
|
|
];
|
|
|
|
nativeBuildInputs = [ cmake makeWrapper ];
|
|
buildInputs = [ libminc ];
|
|
propagatedBuildInputs = with perlPackages; [ perl GetoptTabular MNI-Perllib ];
|
|
|
|
cmakeFlags = [ "-DLIBMINC_DIR=${libminc}/lib/cmake" ];
|
|
# testing broken: './minc_wrapper: Permission denied' from Testing/ellipse0.mnc
|
|
|
|
postFixup = ''
|
|
for prog in autocrop mritoself mritotal xfmtool; do
|
|
echo $out/bin/$prog
|
|
wrapProgram $out/bin/$prog --prefix PERL5LIB : $PERL5LIB;
|
|
done
|
|
'';
|
|
|
|
meta = with lib; {
|
|
homepage = "https://github.com/BIC-MNI/mni_autoreg";
|
|
description = "Tools for automated registration using the MINC image format";
|
|
maintainers = with maintainers; [ bcdarwin ];
|
|
platforms = platforms.unix;
|
|
license = licenses.free;
|
|
};
|
|
}
|